Return to main results Retrieve Phyre Job Id

Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank10Aligned Residues262
% Identity40%Templatec2j0kB_
PDB info PDB header:transferaseChain: B: PDB Molecule:focal adhesion kinase 1; PDBTitle: crystal structure of a fragment of focal adhesion kinase2 containing the ferm and kinase domains.
Resolution3.0 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   222.......230.........240.........250.........260... ......270.. .......280.........290.....
Predicted Secondary structure 























....

..








Query SS confidence 









































. . . .








. .






















Query Sequence  PQTTTFTYDDQWEVDRRSVRLIRQIGAGQFGEVWEGRWNVNV. . . . PVAVKKLKA. . GTADPTDFLAEAQIMKKLRHPKL
Query Conservation               
      
   

 
 

 
         .... 



 
  ..          
   
  
 
 

Alig confidence 









































....








..






















Template Conservation        
      
      
 
 

 
 

 

 
           



  
          
  
  

  
 



Template Sequence  EDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI
Template Known Secondary structure 

TTS



STTB

GGG

SS



SSS



TTTTSTT


TTB
Template Predicted Secondary structure 

































Template SS confidence 















































































   404.....410.........420.........430.........440.........450.........460.........470.........480...
 
   296...300.........310.........320 .........330.........340.........350.........360.........370....
Predicted Secondary structure 







.





























Query SS confidence 
























.





















































Query Sequence  LSLYAVCTRDEPILIVTELMQENLL. TFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKI
Query Conservation 
   
         

 
   
 

.  
              
   
   
  

    

 

   
 
       

Alig confidence 









.













.





















































Template Conservation 
 
 
     .   



    


   
      
          


 

 


   


 


  



      

Template Sequence  VKLIGVITEN. PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKL
Template Known Secondary structure 


SS.S


TT
BTTTT

TTT


S

SGGGTT
Template Predicted Secondary structure 

.























Template SS confidence 















































































   484.....490... ......500.........510.........520.........530.........540.........550.........560..
 
   375....380.........390.........400.........410.........420.........430.........440.........450....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  ADFGLARILMKENEYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRM
Query Conservation   




                    
 


       
 





 



 

 
 
  

           
  
   
Alig confidence 






...............

























































Template Conservation   





...............  
   


 
        







 
 



 
  

       
   
  
 
 
Template Sequence  GDFGLSR. . . . . . . . . . . . . . . LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL
Template Known Secondary structure 






...............

GGG





TTS

TTTT

TT


Template Predicted Secondary structure 






...............























Template SS confidence 















































































   563...... 570.........580.........590.........600.........610.........620.......
 
   455....460.........470.........480.........490.........
Predicted Secondary structure 
















Query SS confidence 












































Query Sequence  PCPAGCPVTLYDIMQQCWRSDPDKRPTFETLQWKLEDLFNLDSSE
Query Conservation    
   
     

  

   
  


   
   
          
Alig confidence 












































Template Conservation    
   
  
  

  

  

  


   
   
  
      
Template Sequence  PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKLQ
Template Known Secondary structure 


TT

TT
SSGGGS

T
Template Predicted Secondary structure 















Template SS confidence 












































   642.......650.........660.........670.........680......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D