 |
| Job Description | O45539 | | Confidence | 99.94% | Date | Sat Apr 13 12:48:12 BST 2013 |
| Rank | 330 | Aligned Residues | 122 |
| % Identity | 22% | Template | c2eo6A_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:b-cell linker protein; |
PDBTitle: solution structure of the sh2 domain from mouse b-cell2 linker protein blnk
|
| Resolution | UNK |
|
 |
|   |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | G | R | T | G | Y | I | P | S | N | Y | V | A | R | E | K | S | I | E | S | Q | P | W | Y | F | G | K | M | R | R | I | D | A | E | K | C | L | L | H | T | L | N | E | H | G | A | F | L | V | R | D | S | E | S | R | Q | H | D | . |
. |
L | S | L | S | V | R | E | N | D | S | V | K | H | Y | R | I | R | Q | L | D |
| Query Conservation |   |
  |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |
|
|   |   |   |   |
|
|
|
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   | . | . |   |   |
|
|
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |
|
|
|   |
|
|   |   |   |   | . |   |
|
|   |
|
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
| Template Sequence |   |
S | G | S | S | G | P | F | N | S | T | F | A | D | Q | E | A | E | L | L | G | K | P | W | Y | A | G | A | C | D | R | K | S | A | E | E | A | L | H | R | S | N | . |
K | D | G | S | F | L | I | R | K | S | S | G | H | D | S | K | Q | P | Y | T | L | V | A | F | F | N | K | R | V | Y | N | I | P | V | R | F | I | E |
| Template Known Secondary structure |   |
S |
|
| S | S | T | T |
|
|  |  |  |  |  |  |  | T | T | T | T |
| S | S |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
| T | T |
| B |
|  |  |  |
| S | T | T |
| S | S |
| S |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|  |  | T |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
|   |
|   |   |
180 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
H | G | G | Y | F | I | . |
. |
. |
. |
. |
A | R | R | R | P | F | A | T | L | H | D | L | I | A | H | Y | Q | R | E | A | D | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | C | V | N | L | G | A | P | C | A | K | S | E | A | P | Q | T |
| Query Conservation |   |
  |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |
| Template Sequence |   |
A | T | K | Q | Y | A | L | G | K | K | K | N | G | E | E | Y | F | G | S | V | V | E | I | V | N | S | H | Q | H | N | P | L | V | L | I | D | S | Q | N | N | T | K | D | S | T | R | L | K | Y | A | V | K | V | S | S | G | P | S | S |
| Template Known Secondary structure |   |
T | T | T |  |  |
| S | S | S |
|
| T | T |
|
|
| B | S | S |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
|
|
| S | S | S |
|
|
|
|
|
|
|
|
|
| B |
|
|
|
|
|
| S |
|
|
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|