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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank129Aligned Residues257
% Identity19%Templatec2c47D_
PDB info PDB header:transferaseChain: D: PDB Molecule:casein kinase 1 gamma 2 isoform; PDBTitle: structure of casein kinase 1 gamma 2
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  RSVRLIRQIGAGQFGEVWEGRWNVNVPVAVKKLKAGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVTELMQE
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Template Sequence  PNFRVGKKIGELRLGKN. . . . LYTNEYVAIKLEPIK. SRAPQLHLEYRFYKQLSATEGVPQVYYFGPGKYNAMVLELLGP
Template Known Secondary structure  GG


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Query Sequence  NLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSL. . . . . SVKIADFGLARILMKEN. . . . E
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Template Sequence  SLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPTKKHIP
Template Known Secondary structure  BTTT


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GGG

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B

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   389390.........400.........410.........420.........430........ .440.........450....... ..460.
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Query Sequence  YEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPG. . . MTNAEVLQQVDAGYRMPCP. . . . AGCP
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Template Sequence  YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLR. GSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP
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   206...210.........220.........230.........240....... ..250.........260.........270.........280....
 
   462.......470.........480.........490.........500
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Query Sequence  VTLYDIMQQCWRSDPDKRPTFETLQWKLEDLFNLDSSEY
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Template Sequence  EEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVF
Template Known Secondary structure  T

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   285....290.........300.........310.........320...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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