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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank191Aligned Residues225
% Identity23%Templatec2bvaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:p21-activated kinase 4; PDBTitle: crystal structure of the human p21-activated kinase 4
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GQFGEVWEGRWN. VNVPVAVKKLKAGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVTELMQENLLTFLQRRG
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Template Sequence  IKIGIVCIATVRSSGKLVAVKKMDL. . . . . . . LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH.
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TTB

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S
BTTT.
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   325....330.........340......... 350.........360.........370.........380.........390......
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
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Query Sequence  RQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMKENEYEARTGARFPIKWTAPEAA
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Template Sequence  TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVEVPRRKLVGT. . . . . PYWMAPELI
Template Known Secondary structure  S


TTB

S

SGGG
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TT

B




B


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Query Sequence  NYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMPC. . PAGCPVTLYDIMQQCWRSDPDKRPTFETL
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Template Sequence  SRLPYGPEVDIWSLGIMVIEMVD. GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL
Template Known Secondary structure  TT

B
TT.SS
TTTTS
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TT



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   488.490.........500.........510 .........520.........530.........540.........550.........560......
 
   486.
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Query Sequence  QW
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Template Conservation 
 
Template Sequence  LK
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 

   567.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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