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Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank104Aligned Residues247
% Identity21%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   237..240.........250......... 260.........270......... 280.........290.........300.........310..
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Query Sequence  RRSVRLIRQIGAGQFGEVWEGRW. NVNVPVAVKKLKAGTADPTD. . . FLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVT
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF
Template Known Secondary structure  TTTTTTTT


SS




TTB


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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   313......320.........330.........340.........350.........360....... ..370.........380.........
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Query Sequence  ELMQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILIN. . . NSLSVKIADFGLARILMKENEY
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Template Sequence  DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW
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S
BTT
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   390.........400.........410.........420.........430.........440.........450... ......460......
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Query Sequence  EARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYR. . . MPCPAGCPVTLYD
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Template Sequence  HGFAGT. . . PGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS
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   171..... ...180.........190.........200........ .210.........220.........230.........240......
 
   467..470.........480.......
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Query Sequence  IMQQCWRSDPDKRPTFETLQW
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Template Sequence  LIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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   247..250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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