Return to main results Retrieve Phyre Job Id

Job DescriptionO45539
Confidence100.00%DateSat Apr 13 12:48:12 BST 2013
Rank249Aligned Residues241
% Identity17%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240..... ....250......... 260.........270 .........280.........290 .........300.........310...
Predicted Secondary structure 
.





.



.






.





Query SS confidence 







.













.










.



















.






















Query Sequence  RSVRLIRQ. IGAGQFGEVWEGRW. NVNVPVAVKKL. KAGTADPTDFLAEAQIMKKL. RHPKLLSLYAVCTRDEPILIVTE
Query Conservation      
   .

 
 

 
     .     



 
.            
   
  
. 
 


   
         

 
Alig confidence 







.













.










.



















.






















Template Conservation    
 
    

 
 

 

 
        



 
             

 

  
  




              
 
Template Sequence  DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE
Template Known Secondary structure  GS
S



SS
SSS



SS

T


TTB


SS
Template Predicted Secondary structure 























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   314.....320.........330.........340.........350.........360.........370.........380.........390...
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  LMQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMKENEYEART
Query Conservation     
 

  
              
   
   
  

    

 

   
 
       

 




             
Alig confidence 












































































...
Template Conservation                              
                     
                          ...
Template Sequence  KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGPCGSAEYMA. . .
Template Known Secondary structure 

TT
BS


TTT


S


GGG
TTB





SSGGG

...
Template Predicted Secondary structure 





















































...
Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.......
 
   394.....400.........410.........420.........430.........440 .........450........ .
Predicted Secondary structure 





















...........








...
Query SS confidence 














































. . . . . . . . . . .

















. . .
Query Sequence  GARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMT. . . . . . . . . . . NAEVLQQVDAGYRMPCPA. . . G
Query Conservation         
 


       
 





 



 

 
 
  

    ...........       
  
     
 ... 
Alig confidence  .....































.








...........

















...
Template Conservation  .....                  



 
  
 

  .
  

                      
              
Template Sequence  . . . . . PEVVEAFSEEASIYDKRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDKDWAH
Template Known Secondary structure  .....SSSTTTT.SS
SS



SS





TT




TT
Template Predicted Secondary structure  .....








.

















Template SS confidence 















































































   259260.........270.........280.........290 .........300.........310.........320.........330..
 
   460.........470.........480.......
Predicted Secondary structure 








Query SS confidence 



























Query Sequence  CPVTLYDIMQQCWRSDPDKRPTFETLQW
Query Conservation   
     

  

   
  


   
  
Alig confidence 



























Template Conservation   
     

   
  

  



 


 
Template Sequence  ISCAAKDLISKLLVRDAKQRLSAAQVLQ
Template Known Secondary structure  S
S
S
TTTS

Template Predicted Secondary structure 









Template SS confidence 



























   337..340.........350.........360....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D