Return to main results Retrieve Phyre Job Id

Job DescriptionO45539
Confidence99.96%DateSat Apr 13 12:48:12 BST 2013
Rank319Aligned Residues129
% Identity19%Templatec1tqmA_
PDB info PDB header:ribosomeChain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of a. fulgidus rio2 serine protein kinase bound to2 amppnp
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270..... ....280.........290.........300.........310...
Predicted Secondary structure 















......







Query SS confidence 



































. . . . . .





































Query Sequence  VRLIRQIGAGQFGEVWEGRWNVNVPVAVKKLKAGTA. . . . . . DPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVTE
Query Conservation    
   

 
 

 
          



 
     ......       
   
  
 
 


   
         

 
Alig confidence 



































......




























....




Template Conservation 
 
   

 
  
 

      
   


                    
           
         .... 

 
Template Sequence  DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVKVKEHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEGN. . . . AVLME
Template Known Secondary structure  S
SSTTT






TTTSSS

TT....
Template Predicted Secondary structure 




























....
Template SS confidence 















































































   92.......100.........110.........120.........130.........140.........150.........160.. .....
 
   314.....320.........330.........340.........350.........360.........370.........380
Predicted Secondary structure 







































Query SS confidence 


































































Query Sequence  LMQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLA
Query Conservation     
 

  
              
   
   
  

    

 

   
 
       

 




Alig confidence 






.......










































.








Template Conservation         .......          
  


  
  

  








 



    .
 



 
 
Template Sequence  LIDAKEL. . . . . . . YRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG. IWIIDFPQS
Template Known Secondary structure 



G.......GG


S
TT
SS

TTTTT.


TT
Template Predicted Secondary structure 




.......












.



Template SS confidence 


































































   181...... ..190.........200.........210.........220.........230 .........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D