Return to main results Retrieve Phyre Job Id

Job DescriptionE6N0W1
Confidence99.66%DateFri May 3 21:47:45 BST 2013
Rank9Aligned Residues112
% Identity15%Templatec2rqrA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:engulfment and cell motility protein 1, linker, dedicator PDBTitle: the solution structure of human dock2 sh3 domain - elmo1 peptide2 chimera complex
ResolutionUNK
Model Dimensions (Å)X:60.029 Y:46.779 Z:41.820

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   518.520.........530.........540.........550.........560.........570.........580.........590.......
Predicted Secondary structure 


































































Query SS confidence 















































































Query Sequence  VASAPNQLGIKVGEIVKIREKSAAGWWEGELIRNGKPIAGWFPGEYVKVLEEAASPATRATAVYDYEASQPDELGFKTGD
Query Conservation         
                               
  
                  




 
   




  

Alig confidence 















































































Template Conservation   

            
  

      
                                  




 
    



  

Template Sequence  SGSSGRLLDLENIQIPDAPPPIPKEPSNYDFSGPSSGIEGRGSSGSSGSSGSSGDKERHGVAIYNFQGSGAPQLSLQIGD
Template Known Secondary structure 







SS





SS







SS



SS


TTTT








S
S



B
S
B


STTB

B
TT
Template Predicted Secondary structure 



































































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   598.600.........610.........620.........630
Predicted Secondary structure 











Query SS confidence 
































Query Sequence  VIIVTDKSEAEWWSGHREQDPSKSGLFPSNYVQ
Query Conservation   
 
    
 


 
      
  
  
 



Alig confidence 






.
























Template Conservation   
 
 
 .    
        
  
 

 


 
Template Sequence  VVRIQET. CGDWYRGYLIKHKMLQGIFPKSFIH
Template Known Secondary structure  .TTSS
TT
GGGB
Template Predicted Secondary structure  .












Template SS confidence 
































   83...... 90.........100.........110....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D