Return to main results Retrieve Phyre Job Id

Job DescriptionE6N0W1
Confidence99.54%DateFri May 3 21:47:45 BST 2013
Rank61Aligned Residues70
% Identity21%Templatec1x6bA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine exchange factor (gef) 16; PDBTitle: solution structures of the sh3 domain of human rho guanine2 exchange factor (gef) 16
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   560.........570.........580.........590.........600.........610.........620.........630.
Predicted Secondary structure 








































Query SS confidence 







































































Query Sequence  PGEYVKVLEEAASPATRATAVYDYEASQPDELGFKTGDVIIVTDKSEAEWWSGHREQDPSKSGLFPSNYVQQ
Query Conservation 
                  




 
   




  

 
 
    
 


 
      
  
  
 



 
Alig confidence 














































.









.












Template Conservation 

               
 
   
 
   



   

 
 
     . 

       .
  
 

 



 
Template Sequence  SGSSGWQGLSSKGDLPQVEITKAFFAKQADEVTLQQADVVLVLQQED. GWLYGERLRD. GETGWFPEDFARF
Template Known Secondary structure 



S






SS

SS




SSSB



TTT.TTTT.


GGG
Template Predicted Secondary structure 

































.




.

Template SS confidence 







































































   3......10.........20.........30.........40......... 50......... 60.........70..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D