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Job DescriptionO01325
Confidence99.96%DateFri May 3 21:21:05 BST 2013
Rank314Aligned Residues225
% Identity12%Templatec4gygA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rio2 kinase; PDBTitle: crystal structure of the rio2 kinase from chaetomium thermophilum
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200.........210.........220.........230...... ...240.........250.........260....
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Query Sequence  INLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVT. . . . . . . . . . ADERITFLREANLMLKLNHKYVVRLYGV
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Template Sequence  YSVGSRIGVGKESDIMIVADE. . . . . KGKQKVLKIHRLGRISFRTVKRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE
Template Known Secondary structure  S
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TT







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T
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   96...100.........110...... ...120.........130.........140.........150.........160.........170
 
   265....270.. .......280.........290.........300.........310.........320.........330........
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Query Sequence  ATQQEPIM. . . . . . IVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKI
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Template Sequence  GFPVPEPIAQSRHTIVMSLVDALPM. . . . . . . RQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAED
Template Known Secondary structure  T
S


TT

S
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   173......180.........190....... ..200.........210.........220.........230.........240.....
 
   339340.........350.........360.........370.........380.........390.........400.........410... .
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Query Sequence  SDFGLSLFGKLHKEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRKVAHEN. . . . L
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Template Sequence  PSSITLTPIIIDFPQMV. . SMDHPNAEMYFDR. . . . . . . DVQCIKRFFERRFHFVSTTPGPFYKDAKKTVGKDGAKRLDA
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   246...250.........260.. .......270..... ....280.........290.........300.........310......
 
   415....420.........430.........440
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Query Sequence  RLKPPSDMPTDDAKVMEMCFEPVDNR
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Template Sequence  ALEASGFTKKMAKDLEAAIREQQESR
Template Known Secondary structure  TTGGGT

TT
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   317..320.........330.........340..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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