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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank212Aligned Residues234
% Identity26%Templatec4g34A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crystal structure of gsk6924 bound to perk (r587-r1092, delete a660-2 t867) at 2.70 a resolution
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250.........260......... 270
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Query Sequence  EQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYVVRLYGVATQQE. . P
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Template Sequence  TDFEPIQCLGRGGFGVVFEAKNK. . . . VDDCNYAIKRIRLPN. RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNKVY
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   590.........600.........610.. .......620....... ..630.........640.........650.........660....
 
   271........280.........290. ........300.........310.........320.........330.........340........
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Query Sequence  IMIVMELCSGGCLKSRIEKKD. . EQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISDFGLSLFGK
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Template Sequence  LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLGTK. .
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   883......890.........900.........910.........920.........930.........940.........950.........960
 
   349350.........360.........370.........380.........390.........400.........410.........420........
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Query Sequence  LHKEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRKVAHENLRLKPPSDMPTDDAK
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Template Sequence  . . . . . . . . . . . . LYMSPEQIHGNSYSHKVDIFSLGLILFELLY. . . PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVM
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   988.990.........1000.........1010........ .1020.........1030.........1040.........1050..
 
   429430.........440........
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Query Sequence  VMEMCFEPVDNRATFVQVCN
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Template Sequence  VQDMLSPSPMERPEAINIIE
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   1053......1060.........1070..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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