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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank105Aligned Residues255
% Identity22%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.........220.........230.........240.. .......250.........260.......
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Query Sequence  QLYHEQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERIT. FLREANLMLKLNHKYVVRLYGVATQ
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Template Sequence  KIINERYKIVDKLGGGGMSTVYLAEDT. . . . ILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE
Template Known Secondary structure  T
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   4.....10.........20.........30 .........40.........50.........60.........70.........
 
   268.270.........280.........290.........300.........310.........320.........330.........340.......
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Query Sequence  QEPIMIVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISDFGLSLFG
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Template Sequence  DDCYYLVMEYIEGPTLSEYIESHG. PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK. .
Template Known Secondary structure  TT


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   80.........90.........100... ......110.........120.........130.........140.........150......
 
   348.350.........360.........370.........380.........390.........400.........410..... ....420....
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Query Sequence  KLHKEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRKVAHENLR. . . LKPPSDMPT
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Template Sequence  . . . . . . . . . . . TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQS
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GGG

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   172.......180.........190.........200.........210.........220.........230.........240
 
   425....430.........440 .........450.........460.
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Query Sequence  DDAKVMEMCFEPVDNR. ATFVQVCNRYKDLTSPLPTWN
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Template Sequence  LSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANE
Template Known Secondary structure  T
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   241........250.........260.........270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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