Return to main results Retrieve Phyre Job Id

Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank179Aligned Residues250
% Identity22%Templatec3rp9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase; PDBTitle: crystal structure of the apo mapk from toxoplasma gondii, 25.m01780 or2 tgme49_007820
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210.........220.........230.........240.........250.........260...
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  VREEWQLYHEQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYVVRLYG
Query Conservation                   

 
 

 

 
            



 
               
   
  
 




 
 
Alig confidence 






.



















.............






































Template Conservation         .   
     

 
 

 
  .............



 
               

 

  
 




 
  
Template Sequence  PHSDWQI. PDRYEIRHLHVCEAYDKLRV. . . . . . . . . . . . . VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD
Template Known Secondary structure 

SS

S.
TT






.............
STTSS


TTB

Template Predicted Secondary structure 



.






.............










Template SS confidence 















































































   45....50. ........60.........70. ........80.........90.........100.........110
 
   264. ....270.........280.........290.........300.........310.........320.........330........
Predicted Secondary structure  .....

































Query SS confidence 

. . . . .








































































Query Sequence  VA. . . . . TQQEPIMIVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKI
Query Conservation    .....       

 
    
 
   
      
       
  


 

 


   


 

   



      

Alig confidence 

.....


















..



















































Template Conservation                

 
        ..       
       
  

  

  

   
 
 
    
           
Template Sequence  IVIPKDVEKFDELYVVLEIADSDFKK. . LFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKV
Template Known Secondary structure 


S
TTT





S..SS



TT
B




GGG
TT

Template Predicted Secondary structure 











..
































Template SS confidence 















































































   120.........130.........140..... ....150.........160.........170.........180.........190.......
 
   339340...... ...350.........360....... ..370.........380.........390.........400...
Predicted Secondary structure 







.














.














.............
Query SS confidence 







.




















.



































. . . . . . . . . . . . .
Query Sequence  SDFGLSLF. GKLHKEQKLMKVPIRWLAPET. LLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLK. . . . . . . . . . . . .
Query Conservation   




  .               
 


 .
       





 



 

 

  
        .............
Alig confidence 







.




















.



































.............
Template Conservation   

                        

            
 

 
  
 


 
                        
Template Sequence  CDFGLARTVDYPENGNSQLPVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPTRGNRDQL
Template Known Secondary structure 


TT
B
TTS
TT








TT

TT




TTTSTTT
SSGGG


S


Template Predicted Secondary structure 


























































Template SS confidence 















































































   198.200.........210.........220.........230.........240.........250.........260.........270.......
 
   404.....410.........420.........430.........440.........
Predicted Secondary structure  ...........................


















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . .













































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . ELRRKVAHENLRLKPPSDMPTDDAKVMEMCFEPVDNRATFVQVCNR
Query Conservation  ...........................     
                  

       
  


   
   
Alig confidence  ...........................













































Template Conservation    
                                          
    


  

  

  



 
 
 
Template Sequence  NVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH
Template Known Secondary structure 



TSS
TTS






GGGGSTTS
S
SSTTTS

S
Template Predicted Secondary structure 






























Template SS confidence 








































































   325....330.........340.........350.........360.........370.........380.........390.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D