Job Description O01325 Confidence 100.00% Date Fri May 3 21:21:05 BST 2013 Rank 160 Aligned Residues 244 % Identity 24% Template c3qd2B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain Resolution 2.81 Å

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		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	Q	I	N	L	G	K	K	L	G	N	G	E	F	G	E	V	F	Q	G	V	L	S	V	G	I	F	T	N	D	V	E	V	A	V	K	T	M	K	G	S	K	V	T	A	D	E	R	I	T	F	L	R	E	A	N	L	M	L	K	L	N	H	K	Y	V	V	R	L	Y	G	V	A	T	Q	Q	E	P	I	.
Query Conservation																																																																																	.
Alig confidence														.											.	.	.	.															.																																						.
Template Conservation														.											.	.	.	.															.
Template Sequence		T	D	F	E	P	I	Q	C	M	G	R	G	.	F	G	V	V	F	E	A	K	N	K	.	.	.	.	V	D	D	C	N	Y	A	I	K	R	I	R	L	P	.	N	R	E	L	A	R	E	K	V	M	R	E	V	K	A	L	A	K	L	E	H	P	G	I	V	R	Y	F	N	A	W	L	E	T	P	P	E	K
Template Known Secondary structure														.		S								T	.	.	.	.	T	T													.	S	T	T	T													T	S				T	T	B												S
Template Predicted Secondary structure														.											.	.	.	.															.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.	.	.	.					.	610	.	.	.	.	.	.	.	.	.	620	.	.		.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
														272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	M	I	V	M	E	L	C	S	G	G	C	L	K	S	R	I	E	K	K	D	.	.	E	Q	L	S	D	V	L	K	R	K	Y	C	K	Q	I	A	K	G	M	R	Y	L	E	K	K	Q	V	I	H	R	D	L	A	A	R	N	V	L	L	D	K	S	D	N	C	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		W	Q	E	E	M	D	E	P	K	V	Y	L	Y	I	Q	M	Q	L	C	R	K	E	N	L	K	D	W	M	N	R	R	C	S	L	E	D	R	E	H	G	V	C	L	H	I	F	I	Q	I	A	E	A	V	E	F	L	H	S	K	G	L	M	H	R	D	L	K	P	S	N	I	F	F	T	M	D	D	V	V	K
Template Known Secondary structure																						S	S								T			S	G	G	G	S																						T	T								G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	D	F	G	L	S	L	F	G	K	L	H	K	E	Q	K	L	M	K	V	P	I	R	W	L	A	P	E	T	L	L	K	G	I	Y	S	S	K	S	D	V	W	S	F	G	V	V	M	F	E	V	F	S	G	E	Y	P	Y	A	D	V	K	V	L	K	E	L	R	R	K	V	A	H	E	N	L	R	L	K
Query Conservation
Alig confidence																			.	.	.																																								.	.	.
Template Conservation																			.	.	.																																								.	.	.
Template Sequence		V	G	D	F	G	L	V	T	A	M	D	Q	D	T	H	G	Q	.	.	.	V	T	K	L	Y	M	S	P	E	Q	I	H	G	N	N	Y	S	H	K	V	D	I	F	S	L	G	L	I	L	F	E	L	L	Y	S	F	S	T	Q	.	.	.	M	E	R	V	R	I	I	T	D	V	R	N	L	K	F	P	L	L
Template Known Secondary structure						T	T					S							.	.	.			G	G	G	S												T																S						.	.	.												T	T
Template Predicted Secondary structure																			.	.	.																																								.	.	.
Template SS confidence
		951	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.				.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.				.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	S	D	M	P	T	D	D	A	K	V	M	E	M	C	F	E	P	V	D	N	R	A	T	F	V	Q	V	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	Q	K	Y	P	Q	E	H	M	M	V	Q	D	M	L	S	P	S	P	T	E	R	P	E	A	T	D	I	I	E
Template Known Secondary structure																			S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1041	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D