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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank38Aligned Residues264
% Identity25%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   174.....180.........190......... 200.........210.........220.........230.........240.........
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Query Sequence  KSGIKLFSWVVREEWQLYHEQINLGK. . . . KLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANL
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Template Sequence  RENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSYGEVLLCKEK. . . . NGHSEKAIKVIKKKF. . . . . HEEIYNEISL
Template Known Secondary structure  GGGGSS





GGGG


S
GGGT

T....TT



T.....
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   30.........40.........50.........60.........70..... ....80.........90 .........100
 
   250.........260.........270.........280.........290.........300.........310.........320.........
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Query Sequence  MLKLNHKYVVRLYGVATQQEPIMIVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVL
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Template Sequence  LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK. FDECDAANIMKQILSGICYLHKHNIVHRDIKPENIL
Template Known Secondary structure  T


TTB


SS

TT
BS
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TT
S

SGGG
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   119120.........130.........140.........150.........160. ........170.........180.........190.......
 
   330 .........340.........350.........360.........370.........380.........390.........400......
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Query Sequence  L. . . DKSDNCKISDFGLSLFGKLHKEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELR
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Template Sequence  LENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK. KYNEKCDVWSCGVIMYILLCGYPPFGG. QNDQDII
Template Known Secondary structure  SSTT

SS


TT


TTS
B



S
TTT

TT.
B
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SS

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   198.200.........210.........220.........230.........240. ........250.........260........ .270.....
 
   407..410......... 420.........430.........440.........
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Query Sequence  RKVAHENLRLKPP. . . SDMPTDDAKVMEMCFEPVDNRATFVQVCNR
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Template Sequence  KKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS
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TTS
T
SSTTTS

TS
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   276...280.........290.........300.........310.........320.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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