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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank70Aligned Residues241
% Identity31%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250.........260.........270..
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Query Sequence  EQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYVVRLYGVATQQEPIM
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDK. . . . VTHVERAIKIIRKSSN. . . . . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY
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...T....TT



TT.....TT


TTB


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   60.........70.. ....... 80.........90..... ....100.........110.........120.......
 
   273......280.........290.........300.........310.........320.........330 .........340.........
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Query Sequence  IVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLL. . . DKSDNCKISDFGLSLFGKL
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Template Sequence  LVMECYKGGELFDEIIHRMK. FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN
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S
BSS.

TT
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   136...140.........150..... ....160.........170.........180.........190.........200.........210....
 
   350.........360.........370.........380.........390.........400.........410..... ....420......
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Query Sequence  HKEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRKVAHENLR. . . LKPPSDMPTDD
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Template Sequence  QKKMKERLGTAYYIAPEVLRK. KYDEKCDVWSIGVILFILLAGYPPFGGQT. DQEILRKVEKGKYTFDSPEWKNVSEGAK
Template Known Secondary structure  TB
B



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SGGGTTS
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   215....220.........230..... ....240.........250.........260.... .....270.........280.........290..
 
   427..430.........440........
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Query Sequence  AKVMEMCFEPVDNRATFVQVCN
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Template Sequence  DLIKQMLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   293......300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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