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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank218Aligned Residues252
% Identity25%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200.........210.........220.........230.........240.........250.........260.........270.
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Query Sequence  HEQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYVVRLYGVATQQEPI
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Template Sequence  QKKYHLKGAIGQGSYGVVRVAIEN. . . . QTRAIRAIKIMNKNKIRQKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYI
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   7..10.........20.........30 .........40.........50.........60.........70.........80..
 
   272.......280.........290.. .......300.........310....
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Query Sequence  MIVMELCSGGCLKSRIEKKDE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QLSDVLKRKYCKQIAKGMRYLE
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Template Sequence  CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLH
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   315....320.........330.........340.........350.........360.........370. ........380.........390..
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Query Sequence  KKQVIHRDLAARNVLLDKSDNCKISDFGLSLFGKLHKEQKLMKVPIRWLAPETLLKG. . IYSSKSDVWSFGVVMFEVFSG
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Template Sequence  NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGAGTP. YFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG
Template Known Secondary structure  TT




GGGS
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TT
GGGTT




G.GG

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   168.170.........180.........190.........200.........210.. .......220.........230.........240......
 
   393......400.........410... ......420.........430.........440........
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Query Sequence  EYPYADVKVLKELRRKVAHEN. . LRLKPPSDMPTDDAKVMEMCFEPVDNRATFVQVCN
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Template Sequence  AVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ
Template Known Secondary structure  S
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TTSGGGGGS
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   255....260.........270.........280.........290.........300.........310..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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