Job Description O01325 Confidence 99.23% Date Fri May 3 21:21:05 BST 2013 Rank 402 Aligned Residues 85 % Identity 12% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																						.	.																																									.	.	.
Query SS confidence																						.	.																																									.	.	.
Query Sequence		D	E	P	F	Y	H	G	Y	M	S	R	E	E	S	E	K	L	V	R	S	.	.	Q	G	E	F	L	L	R	K	T	E	L	T	K	R	G	E	V	V	V	L	S	V	F	W	D	E	G	V	H	H	L	V	V	E	K	A	N	N	G	L	.	.	.	Y	Y	L	K	E	F	C	F	E	N	I	S	D	L	V
Query Conservation																						.	.																																									.	.	.
Alig confidence									.													.	.																							.																		.	.	.
Template Conservation									.																																					.
Template Sequence		N	H	P	Y	Y	F	P	.	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	.	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I
Template Known Secondary structure		T		T	T	B			.											T	T	S		T	T									S	T	T										.		T	T																				S	S	S				S	S
Template Predicted Secondary structure									.																																					.
Template SS confidence
		9	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	H	H	Q	T	R	A	S	V	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	Y	L	Q	N	K	I	R	L	L	N
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D