Return to main results Retrieve Phyre Job Id

Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank25Aligned Residues256
% Identity23%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.........220.........230......... 240.........250.........260.......
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Query Sequence  QLYHEQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADE. RITFLREANLMLKLNHKYVVRLYGVATQ
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Template Sequence  PMGEDWFLDFRVLGRGGFGEVFACQMK. . . . ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET
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   181........190.........200....... ..210.........220.........230.........240.........250......
 
   268.270.........280......... 290.........300.........310.........320.........330.........340....
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Query Sequence  QEPIMIVMELCSGGCLKSRIEK. . . KDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISDFGLS
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Template Sequence  KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA
Template Known Secondary structure  SS


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   257..260.........270.........280.........290.........300.........310.........320.........330......
 
   345. ...350.........360.........370.........380.........390.........400 .........410.........420
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Query Sequence  LF. GKLHKEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVK. . . VLKELRRKVAHENLRLKPPS
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Template Sequence  VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT. YPDK
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   337..340.........350.........360.........370.........380.........390.........400.........410. ....
 
   421........430.........440 .........
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Query Sequence  DMPTDDAKVMEMCFEPVDNR. . . . . ATFVQVCNR
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Template Sequence  FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH
Template Known Secondary structure  S
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SSGGGS


BTTBSTTGGGS
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   416...420.........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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