Job Description O01325 Confidence 100.00% Date Fri May 3 21:21:05 BST 2013 Rank 128 Aligned Residues 244 % Identity 23% Template c2zv2A_ PDB info PDB header:transferase/transferase inhibitor Chain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase kinase 2; PDBTitle: crystal structure of human calcium/calmodulin-dependent protein kinase2 kinase 2, beta, camkk2 kinase domain in complex with sto-609 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	Y	H	E	Q	I	N	L	G	K	K	L	G	N	G	E	F	G	E	V	F	Q	G	V	L	S	V	G	I	F	T	N	D	V	E	V	A	V	K	T	M	K	G	S	K	V	T	A	D	E	R	I	T	F	L	R	E	A	N	L	M	L	K	L	N	H	K	Y	V	V	R	L	Y	G	V	A	T	Q	Q	.
Query Conservation																																																																																	.
Alig confidence														.	.													.	.	.	.															.	.	.	.	.	.	.																													.
Template Conservation														.	.													.	.	.	.															.	.	.	.	.	.	.
Template Sequence		V	Q	L	N	Q	Y	T	L	K	D	E	I	.	.	G	K	Y	G	V	V	K	L	A	Y	N	E	.	.	.	.	N	D	N	T	Y	Y	A	M	K	V	L	S	K	K	.	.	.	.	.	.	.	E	Q	V	Y	Q	E	I	A	I	L	K	K	L	D	H	P	N	V	V	K	L	V	E	V	L	D	D	P	N
Template Known Secondary structure					T	T								.	.												T	.	.	.	.	T	T	T												.	.	.	.	.	.	.												T				T	T	B										S	S
Template Predicted Secondary structure														.	.													.	.	.	.															.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
			269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure		.																																																																															.
Query SS confidence		.																																																																															.
Query Sequence		.	E	P	I	M	I	V	M	E	L	C	S	G	G	C	L	K	S	R	I	E	K	K	D	E	Q	L	S	D	V	L	K	R	K	Y	C	K	Q	I	A	K	G	M	R	Y	L	E	K	K	Q	V	I	H	R	D	L	A	A	R	N	V	L	L	D	K	S	D	N	C	K	I	S	D	F	G	L	S	L	F	.
Query Conservation		.																																																																															.
Alig confidence		.																		.	.																																																												.
Template Conservation																				.	.
Template Sequence		E	D	H	L	Y	M	V	F	E	L	V	N	Q	G	P	V	M	E	.	.	V	P	T	L	K	P	L	S	E	D	Q	A	R	F	Y	F	Q	D	L	I	K	G	I	E	Y	L	H	Y	Q	K	I	I	H	R	D	I	K	P	S	N	L	L	V	G	E	D	G	H	I	K	I	A	D	F	G	V	S	N	E	F
Template Known Secondary structure		S	S										T	T		B	S			.	.	S	S		S	S																								T	T								G	G	G					T	T	S								T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		G	K	L	H	K	E	Q	K	L	M	K	V	P	I	R	W	L	A	P	E	T	L	L	K	G	I	.	.	.	Y	S	S	K	S	D	V	W	S	F	G	V	V	M	F	E	V	F	S	G	E	Y	P	Y	A	D	V	K	V	L	K	E	L	R	R	K	V	A	H	E	N	L	R	L	K	P	P	S	D	M	P
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		K	G	S	D	A	L	L	S	N	T	V	G	T	P	A	F	M	A	P	E	S	L	S	E	T	R	K	I	F	S	G	K	A	L	D	V	W	A	M	G	V	T	L	Y	C	F	V	F	G	Q	C	P	F	M	D	E	R	I	M	C	L	H	S	K	I	K	S	Q	A	L	E	F	P	D	Q	P	D	I	A	E
Template Known Secondary structure		S	S	S	S								S		G	G	G			G	G	G			T	T						S																		S	S		S	S			S	S																	S	S	S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	D	A	K	V	M	E	M	C	F	E	P	V	D	N	R	A	T	F	V	Q	V	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	K	D	L	I	T	R	M	L	D	K	N	P	E	S	R	I	V	V	P	E	I	K	L
Template Known Secondary structure											T		S		T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D