Return to main results Retrieve Phyre Job Id

Job DescriptionO01325
Confidence20.94%DateFri May 3 21:21:05 BST 2013
Rank457Aligned Residues83
% Identity16%Templatec2yt6A_
PDB info PDB header:cell cycleChain: A: PDB Molecule:adult male urinary bladder cdna, riken full- PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
Predicted Secondary structure 
































































Query SS confidence 















































































Query Sequence  ETAVRGPDLLLKATDETSSDGASTSLSKSVEESAPNKDKSNSSLVKSHHVLKIKLKKITNWSGCSGALLDDEPFYHGYMS
Query Conservation   
    
           
   
   
 
   
                                        



   
Alig confidence 































































..













Template Conservation             

 

 
    


   

 
 

      

       
  
 


 

   ..       
      
Template Sequence  TGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPA. . DSIQAEEWYFGKMG
Template Known Secondary structure  SS

SS

SS



SSTTS



TT

S
TT
SSS


TTTS..SS
TTT


Template Predicted Secondary structure 






























..













Template SS confidence 















































































   21........30.........40.........50.........60.........70.........80.... .....90........
 
   98.100..
Predicted Secondary structure 
Query SS confidence 




Query Sequence  REESE
Query Conservation 
    
Alig confidence 




Template Conservation 
  

Template Sequence  RKDAE
Template Known Secondary structure  S



Template Predicted Secondary structure 
Template SS confidence 




   99100...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D