Job Description O01325 Confidence 98.64% Date Fri May 3 21:21:05 BST 2013 Rank 411 Aligned Residues 77 % Identity 25% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		D	E	P	F	Y	H	G	Y	M	S	R	E	E	S	E	K	L	V	R	S	.	Q	G	E	F	L	L	R	K	T	E	L	T	K	R	G	E	V	V	V	L	S	V	F	W	D	E	G	V	H	H	L	V	V	E	K	A	N	N	G	L	Y	Y	L	K	E	F	C	F	E	N	I	S	D	L	V	R	Y	H	H
Query Conservation																						.
Alig confidence								.														.										.					.	.
Template Conservation								.																								.					.	.
Template Sequence		K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	.	.	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	E	H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V	I	S	V	Y	V
Template Known Secondary structure		G	S	T	T			.														S	S									.	S	S	T	T	.	.										T	T											S	S					T	T				S	S								T
Template Predicted Secondary structure								.																								.					.	.
Template SS confidence
		791	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.		820	.	.	.			.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.
		167	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		867	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D