286 c2vagA_ Probab=100.00  E-value=6.8e-34  Score=213.44  Aligned_columns=255  Identities=22%

Q ss_pred             EEEHHHEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCE------EEEE
Q ss_conf             5222024313664627560899999714767887689999982356898999999999999984598856------2199
Q batch____       189 QLYHEQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYV------VRLY  262 (474)
Q Consensus       189 ~~~~~~~~~~~~lG~G~fG~Vy~g~~~~~~~~~~~~VAvK~l~~~~~~~~~~~~~~~E~~~l~~l~Hpni------v~l~  262 (474)
                      ++-.++|++.++||+|+||.||+|+..   ..++..||||+++   ........+++|+.+|+.++|+|+      +.+.
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~---~~~~~~vAiK~i~---~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~   82 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDH---KAGGRHVAVKIVK---NVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQML   82 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEET---TTTTEEEEEEEEC---SSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEE---CCCCEEEEEEEEC---CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
T ss_conf             486782599999876288489999997---6798399999983---9905689999999999984312223312220000


Q ss_pred             EEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf             99987896899998899880999986025688989999999999999998772893612446642010466652235564
Q batch____       263 GVATQQEPIMIVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISDFG  342 (474)
Q Consensus       263 g~~~~~~~~~iV~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qia~gL~ylh~~~iiH~dl~~~Nill~~~~~~kl~DFG  342 (474)
                      +.......++++++++..+.+..................++.++..++.++|..+++|+|++|.||+++.++..++.+|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~  162 (330)
T c2vagA_          83 EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKR  162 (330)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred             CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCC
T ss_conf             12333200001221123675211122211101365655555445555543110122223455415898578862000345


Q ss_pred             CCCCCCCCCCCEEECC------------CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf             3113565443100001------------1234898899678998347899999999999808899998880899999986
Q batch____       343 LSLFGKLHKEQKLMKV------------PIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRKVA  410 (474)
Q Consensus       343 ls~~~~~~~~~~~~~~------------~~~y~aPE~l~~~~~~~ksDvwS~Gvil~El~tG~~P~~~~~~~~~~~~~i~  410 (474)
                      .+.............+            ...+.+|+......+..+.|+|++||++|++.++..|+........+.....
T Consensus       163 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~  242 (330)
T c2vagA_         163 DERTLINPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER  242 (330)
T ss_dssp             EEEEESCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             43344443210001466332675420012102321000001111235421022587310048898875896899999985


Q ss_pred             CCCC------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             0788------------------------------------------7788789988999999862689677789899999
Q batch____       411 HENL------------------------------------------RLKPPSDMPTDDAKVMEMCFEPVDNRATFVQVCN  448 (474)
Q Consensus       411 ~~~~------------------------------------------~~~~~~~~~~~~~li~~~~~~~p~~RPt~~~i~~  448 (474)
                      ....                                          ...+...++++..+|..||..||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         243 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             13889988974420121235465665321000111001233310023565458999999999866588111776789967


Q ss_pred             H
Q ss_conf             9
Q batch____       449 R  449 (474)
Q Consensus       449 ~  449 (474)
                      +
T Consensus       323 H  323 (330)
T c2vagA_         323 H  323 (330)
T ss_dssp             S
T ss_pred             C
T ss_conf             9


