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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank245Aligned Residues265
% Identity24%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  VREEWQLYHEQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYVVRLYG
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Template Sequence  PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR. . . . . DGAKVALKRRTPE. . SSQGIEEFETEIETLSFCRHPHLVSLIG
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B
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   30.........40.........50.........60. ........70.... .....80.........90.........100..
 
   264.....270.........280.........290. ........300.........310.........320.........330.........340
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Query Sequence  VATQQEPIMIVMELCSGGCLKSRIEKKD. . . EQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISD
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Template Conservation                                                                                  
Template Sequence  FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITD
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   341..... ...350.........360.........370.........380.........390.........400.........410.
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Query Sequence  FGLSLF. GKLHKEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRKVAH. . . . . . . .
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Template Sequence  FGISKKGTELDQTHLVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ
Template Known Secondary structure 
TT

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   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   412.......420.........430.........440.........450.....
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Query Sequence  . . . . . . . ENLRLKPPSDMPTDDAKVMEMCFEPVDNRATFVQVCNRYKDLTS
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Template Sequence  LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR
Template Known Secondary structure 

SSSSSS
TT
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   265....270.........280.........290.........300.........310.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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