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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank227Aligned Residues250
% Identity19%Templatec2pmoX_
PDB info PDB header:transferaseChain: X: PDB Molecule:ser/thr protein kinase; PDBTitle: crystal structure of pfpk7 in complex with hymenialdisine
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230......... 240.........250.......
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Query Sequence  EQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADE. . . . . . . . . . . . . . . RITFLREANLMLKLNHKY
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Template Sequence  NDYRIIRTLNQGKFNKIILCEKD. . . . . . NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY
Template Known Secondary structure  TT
SS
T......TTT



SSSS

TT


SS
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   26...30.........40........ .50.........60.........70.........80.........90.........
 
   258.260.........270.........280......... 290.........300.........310..... ....320.........
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Query Sequence  VVRLYGVATQQEPIMIVMELCSGGCLKSRIEK. . . . . . . KDEQLSDVLKRKYCKQIAKGMRYLEK. KQVIHRDLAARNVL
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Template Sequence  CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL
Template Known Secondary structure  B


SSSS

TT
BSSSSSSS
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TT

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GGG
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   100.........110.........120.........130.........140.........150.........160.........170.........
 
   330.........340.........350.........360......... 370.........380.........390.........400........
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Query Sequence  LDKSDNCKISDFGLSLFGKLHKEQKLMKVPIRWLAPETLL. KGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRK
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Template Sequence  MDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN
Template Known Secondary structure 
SS




TT

BTT
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   180.........190.........200.........210.........220.........230.........240.........250.........
 
   409410..... ....420.........430.........440........
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Query Sequence  VAHENLR. . . . . . . . . . LKPPSDMPTDDAKVMEMCFEPVDNRATFVQVCN
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Template Sequence  IRTKNIEYPLDRNHFLYPLTNFLSNEDIDFLKLFLRKNPAERITSEDALK
Template Known Secondary structure  TTT






GGGTTSTTT




S
SSTTTS

T
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   260.........270.........280.........290.........300.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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