Return to main results Retrieve Phyre Job Id

Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank10Aligned Residues252
% Identity35%Templatec2j0kB_
PDB info PDB header:transferaseChain: B: PDB Molecule:focal adhesion kinase 1; PDBTitle: crystal structure of a fragment of focal adhesion kinase2 containing the ferm and kinase domains.
Resolution3.0 Å
Model Dimensions (Å)X:63.261 Y:43.250 Z:45.359

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210.........220.........230.........240.........250.........260......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  EWQLYHEQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYVVRLYGVAT
Query Conservation                

 
 

 

 
            



 
               
   
  
 




 
 
   
Alig confidence 



























.


















.






























Template Conservation     
      
 
 

 
 

 

 
  .         



  
   .       
  
  

  
 




 
 
   
Template Sequence  DYEIQRERIELGRCIGEGQFGDVHQGIY. MSPENPAMAVAIKTCKNCT. SDSVREKFLQEALTMRQFDHPHIVKLIGVIT
Template Known Secondary structure  TTB

GGG

SS

.

SSS



TTTT.STT


TTB


Template Predicted Secondary structure 








.








.





Template SS confidence 















































































   414.....420.........430.........440. ........450.........460 .........470.........480.........490.
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  QQEPIMIVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISDFGLSLF
Query Conservation        

 
    
 
   
      
       
  


 

 


   


 

   



      

 




  
Alig confidence 

.












































































Template Conservation    .   



    


   
      
          


 

 


   


 


  



      

 





 
Template Sequence  EN. PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRL
Template Known Secondary structure  SS.S


TT
BTTTT

TTT


S

SGGGTT







Template Predicted Secondary structure 

.































Template SS confidence 















































































   492. ......500.........510.........520.........530.........540.........550.........560.........570
 
   347..350.........360.........370.........380.........390. ........400.........410.........420.....
Predicted Secondary structure 



















.





















Query SS confidence 












































.

































Query Sequence  GKLHKEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFS. GEYPYADVKVLKELRRKVAHENLRLKPPSDMPTD
Query Conservation                 
 


 
       





 



 

 
.
  
             
                
Alig confidence  ............
































.








.























Template Conservation  ............ 
   


 
        







 
 



 
  

    .   
   
  
 
   
   
  
Template Sequence  . . . . . . . . . . . . PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK. NNDVIGRIENGERLPMPPNCPPTL
Template Known Secondary structure  ............
GGG





TTS

TTTT

.TT





TT

Template Predicted Secondary structure  ............

















.











Template SS confidence 















































































   585....590.........600.........610.........620....... ..630.........640.........650.
 
   426...430.........440.........450....
Predicted Secondary structure 







Query SS confidence 




























Query Sequence  DAKVMEMCFEPVDNRATFVQVCNRYKDLT
Query Conservation    

       
  


   
   
    
Alig confidence 




























Template Conservation    

  

  

  


   
   
  
 
Template Sequence  YSLMTKCWAYDPSRRPRFTELKAQLSTIL
Template Known Secondary structure  TT
SSGGGS

Template Predicted Secondary structure 






Template SS confidence 




























   652.......660.........670.........680
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D