Job Description O01325 Confidence 100.00% Date Fri May 3 21:21:05 BST 2013 Rank 154 Aligned Residues 251 % Identity 29% Template c2h6dA_ PDB info PDB header:signaling protein,transferase Chain: A: PDB Molecule:5'-amp-activated protein kinase catalytic subunit PDBTitle: protein kinase domain of the human 5'-amp-activated protein2 kinase catalytic subunit alpha-2 (ampk alpha-2 chain) Resolution 1.85 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		Q	L	Y	H	E	Q	I	N	L	G	K	K	L	G	N	G	E	F	G	E	V	F	Q	G	V	L	S	V	G	I	F	T	N	D	V	E	V	A	V	K	T	M	K	G	S	K	V	.	T	A	D	E	R	I	T	F	L	R	E	A	N	L	M	L	K	L	N	H	K	Y	V	V	R	L	Y	G	V	A	T	Q
Query Conservation																																																	.
Alig confidence																													.	.	.	.																	.
Template Conservation																													.	.	.	.
Template Sequence		R	V	K	I	G	H	Y	V	L	G	D	T	L	G	V	G	T	F	G	K	V	K	I	G	E	H	Q	.	.	.	.	L	T	G	H	K	V	A	V	K	I	L	N	R	Q	K	I	R	S	L	D	V	V	G	K	I	K	R	E	I	Q	N	L	K	L	F	R	H	P	H	I	I	K	L	Y	Q	V	I	S	T
Template Known Secondary structure						T	T											S	S									T	.	.	.	.	T	T																	T	T														T				T	T	B
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	P	I	M	I	V	M	E	L	C	S	G	G	C	L	K	S	R	I	E	K	K	D	E	Q	L	S	D	V	L	K	R	K	Y	C	K	Q	I	A	K	G	M	R	Y	L	E	K	K	Q	V	I	H	R	D	L	A	A	R	N	V	L	L	D	K	S	D	N	C	K	I	S	D	F	G	L	S	L	F	G
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		P	T	D	F	F	M	V	M	E	Y	V	S	G	G	E	L	F	D	Y	I	C	K	H	G	R	.	V	E	E	M	E	A	R	R	L	F	Q	Q	I	L	S	A	V	D	Y	C	H	R	H	M	V	V	H	R	D	L	K	P	E	N	V	L	L	D	A	H	M	N	A	K	I	A	D	F	G	L	S	N	M	M
Template Known Secondary structure		S	S											S		B										S	.																									S	S						G	G	G					T	T	S									G	G	G
Template Predicted Secondary structure																											.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		K	L	H	K	E	Q	K	L	M	K	V	P	I	R	W	L	A	P	E	T	L	L	K	G	I	.	Y	S	S	K	S	D	V	W	S	F	G	V	V	M	F	E	V	F	S	G	E	Y	P	Y	A	D	V	K	V	L	K	E	L	R	R	K	V	A	H	E	N	L	R	L	K	P	P	S	D	M	P	T	D	D
Query Conservation																											.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.												.																																				.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Template Sequence		S	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	P	E	V	I	S	G	R	L	Y	A	G	P	E	V	D	I	W	S	C	G	V	I	L	Y	A	L	L	C	G	T	L	P	F	D	D	E	H	V	P	T	L	F	K	K	.	.	I	R	G	G	V	F	Y	I	P	E	Y	L	N	R	S	V	A
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.				T	G	G	G	T	T	S																						S	S		S	S			S	S								.	.										T	T	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Template SS confidence
		165														.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V	M	E	M	C	F	E	P	V	D	N	R	A	T	F	V	Q	V	C	N	R	Y	K	D	L	T	S	P	L	P	T	W
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		T	L	L	M	H	M	L	Q	V	D	P	L	K	R	A	T	I	K	D	I	R	E	H	.	E	W	F	K	Q	D	L	P	S	Y
Template Known Secondary structure								T		S	S	G	G	G	S									S	.					T	T			G	G
Template Predicted Secondary structure																									.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D