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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank97Aligned Residues247
% Identity29%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250.........260.........270..
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Query Sequence  EQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYVVRLYGVATQQEPIM
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNR. . . . VTEEAVAVKIVDMKRCPEN. . . . IKKEICINKMLNHENVVKFYGHRREGNIQY
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S



SST....TT

TT


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TTB


STT
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   7..10.........20......... 30.........40........ .50.........60.........70........
 
   273......280.........290.........300.........310.........320.........330.........340...... ...
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Query Sequence  IVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISDFGLSLF. . . GKL
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Template Sequence  LFLEYCSGGELFDRIEPDIG. MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR
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TTGGGGSBTTTB.

TT
S

SGGG
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TT

TT
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   82.......90.........100. ........110.........120.........130.........140.........150.........160
 
   350.........360.........370... ......380.........390.........400.........410........ .420.......
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Query Sequence  HKEQKLMKVPIRWLAPETLLKGIY. SSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRKVAHENLRLKP. PSDMPTDDA
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Template Sequence  ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA
Template Known Secondary structure 

B
S

S
GGGS

SSB
SS
S
SS

TT
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TTSTTGGGT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   428.430.........440........
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Query Sequence  KVMEMCFEPVDNRATFVQVCN
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Template Sequence  LLHKILVENPSARITIPDIKK
Template Known Secondary structure  S
SSTTTS

TT
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   241........250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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