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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank205Aligned Residues229
% Identity23%Templatec2bvaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:p21-activated kinase 4; PDBTitle: crystal structure of the human p21-activated kinase 4
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  GNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYVVRLYGVATQQEPIMIVMELCSGG
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Template Sequence  NFIKIGIVCIATVR. . . . SSGKLVAVKKMDL. . . . . . . . . . LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG
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   323......330...... ...340......... 350.........360.........370.........380........
 
   282.......290.........300.........310.........320.........330.........340.........350.........360.
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Query Sequence  CLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISDFGLSLFGKLHKEQKLMKVPIR
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Template Sequence  ALTDIVTHTR. . MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVEVPRRKLV. . GTPY
Template Known Secondary structure  BTTTS
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SGGG
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   402.......410. ........420.........430.........440.........450.........460.........470... ....
 
   362.......370.........380.........390.........400.........410... ......420.........430.........440
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Query Sequence  WLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRKVAHEN. LRLKPPSDMPTDDAKVMEMCFEPVDNR
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Template Sequence  WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR
Template Known Secondary structure  G

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   481........490.........500.........510.........520.........530.........540.........550.........560
 
   441.......
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Query Sequence  ATFVQVCN
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Template Sequence  ATAAELLK
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   561.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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