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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank251Aligned Residues246
% Identity18%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200 .........210.........220.........230.........240.........250... ......260.........
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Query Sequence  HEQINLGKK. LGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKL. NHKYVVRLYGVATQQE
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Template Sequence  EDVYQLQEDVLGEGAHARVQTCINL. . . . ITSQEYAVKIIEKQPGHIRSR. . VFREVEMLYQCQGHRNVLELIEFFEEED
Template Known Secondary structure  GGS
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   80.........90.........100.... .....110.........120..... ....130.........140.........150...
 
   270.........280.........290.........300.........310.........320.........330.........340.........
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Query Sequence  PIMIVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISDFGLSLFGKL
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Template Sequence  RFYLVFEKMRGGSILSHIH. KRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ. . . . . VSPVKICDF
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   154.....160.........170.. .......180.........190.........200.........210........ .220.......
 
   350.........360.........370.........380.........390.........400... ......410.........
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Query Sequence  HKEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLK. . . . . . . . . . ELRRKVAHENLRLKPP
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Template Sequence  GPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDK
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   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   420.........430.........440.........
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Query Sequence  . . . SDMPTDDAKVMEMCFEPVDNRATFVQVCNR
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Template Sequence  DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH
Template Known Secondary structure  TTS
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   333......340.........350.........360.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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