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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank135Aligned Residues253
% Identity24%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   190.........200.........210.........220.........230.... .....240.........250.. .......260.......
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Query Sequence  LYHEQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSK. VTADERITFLREANLMLK. LNHKYVVRLYGVATQ
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLK. . . . KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT
Template Known Secondary structure 

STT
SST....TT

GGG

STTTTTTTSSTTB


B
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   240.........250.........260..... ....270.........280.........290.........300.........310.....
 
   268.270.........280.........290.........300.........310.........320.........330.........340.......
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Query Sequence  QEPIMIVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLDKSDNCKISDFGLSLFG
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Template Sequence  ESRLFFVIEYVNGGDLMFHMQRQRK. LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG
Template Known Secondary structure  SS


S
BTTSS.

TT
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GGG
TTS



TT
B

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   316...320.........330.........340 .........350.........360.........370.........380.........390....
 
   348.350.........360.........370.........380.........390.........400.........410.........420.......
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Query Sequence  KLHKEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRKVAHENLRLKPPSDMPTDDA
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Template Sequence  LRPGDTTSFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDQ. NTEDYLFQVILEKQIR. IPRSMSVKAAS
Template Known Secondary structure 

TT

B


S
GGG

TT

B
TSS
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   395....400.........410.........420.........430.........440..... ....450.........460. ........470..
 
   428.430.........440.. .......
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Query Sequence  KVMEMCFEPVDNRAT. . . . . . FVQVCNR
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Template Sequence  VLKSFLNKDPKERLGCLPQTGFADIQGH
Template Known Secondary structure  T
SSSTTSTTTSTTTS
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   483......490.........500.........510
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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