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Job DescriptionO01325
Confidence100.00%DateFri May 3 21:21:05 BST 2013
Rank120Aligned Residues250
% Identity22%Templatec1kobB_
PDB info PDB header:kinaseChain: B: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (aplysia), autoregulated protein2 kinase domain
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250.........260.........270..
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Query Sequence  EQINLGKKLGNGEFGEVFQGVLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYVVRLYGVATQQEPIM
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Template Sequence  DYYDILEELGSGAFGVVHRCVEK. . . . ATGRVFVAKFINTP. . YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMV
Template Known Secondary structure  GTTTT....TT



..STT

STTB


SS
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   51........60.........70... ......80....... ..90.........100.........110.........120....
 
   273......280.........290.........300.........310.........320.........330. ........340.........350
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Query Sequence  IVMELCSGGCLKSRIEKKDEQLSDVLKRKYCKQIAKGMRYLEKKQVIHRDLAARNVLLD. . KSDNCKISDFGLSLFGKLH
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Template Sequence  LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD
Template Known Secondary structure 




BTT
TT



TTT




GGGSSTT
S



TT


TT
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   125....130.........140.........150.........160.........170.........180.........190.........200....
 
   351........360.........370.........380.........390.........400.........410... ......420........
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Query Sequence  KEQKLMKVPIRWLAPETLLKGIYSSKSDVWSFGVVMFEVFSGEYPYADVKVLKELRRKVAHEN. . LRLKPPSDMPTDDAK
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Template Sequence  EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF
Template Known Secondary structure  S
TTGGG

TT

B
S

TT

SST




TTTTTTS
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   205....210.........220.........230.........240.........250.........260.........270.........280....
 
   429430.........440........
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Query Sequence  VMEMCFEPVDNRATFVQVCN
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Template Sequence  IKNLLQKEPRKRLTVHDALE
Template Known Secondary structure  TTS
SSGGGS

TT
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   285....290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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