Job Description O01325 Confidence 100.00% Date Fri May 3 21:21:05 BST 2013 Rank 5 Aligned Residues 416 % Identity 28% Template c1k9aB_ PDB info PDB header:transferase Chain: B: PDB Molecule:carboxyl-terminal src kinase; PDBTitle: crystal structure analysis of full-length carboxyl-terminal2 src kinase at 2.5 a resolution Resolution 2.50 Å Model Dimensions (Å) X:75.672 Y:69.041 Z:57.713

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		V	E	T	A	V	R	G	P	D	L	L	L	K	A	T	D	E	T	S	S	D	G	A	S	T	S	L	S	K	S	V	E	E	S	A	P	N	K	D	K	S	N	S	S	L	V	K	S	H	H	V	L	K	I	K	L	K	K	I	T	N	W	S	G	C	S	G	.	.	.	.	A	L	L	D	D	E	P	F	Y
Query Conservation																																																																					.	.	.	.
Alig confidence																																																																					.	.	.	.
Template Conservation
Template Sequence		I	Q	A	S	W	P	S	G	T	E	C	I	A	K	Y	N	F	H	G	T	A	E	Q	D	L	P	F	C	K	G	D	V	L	T	I	V	A	V	T	K	D	P	N	W	Y	K	A	K	N	K	V	G	R	E	G	I	I	P	A	N	Y	V	Q	K	R	E	G	V	K	A	G	T	K	L	S	L	M	P	W	F
Template Known Secondary structure				S				T	T						S	S		B			S	S	T	T	B			B		T	T										S	S	T	T							T	T	S							G	G	G										S	S	S			S		T	T	B
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		H	G	Y	M	S	R	E	E	S	E	K	L	V	R	.	.	S	Q	G	E	F	L	L	R	K	T	E	L	T	K	R	G	E	V	V	V	L	S	V	F	W	D	E	G	V	H	H	L	V	V	E	K	A	N	N	G	L	Y	Y	L	K	E	F	C	F	E	N	I	S	D	L	V	R	Y	H	H	Q	T	R	A
Query Conservation																.	.
Alig confidence																.	.																.	.
Template Conservation																																	.	.
Template Sequence		H	G	K	I	T	R	E	Q	A	E	R	L	L	Y	P	P	E	T	G	L	F	L	V	R	E	S	T	N	Y	P	G	.	.	D	Y	T	L	C	V	S	C	E	G	K	V	E	H	Y	R	I	M	Y	H	A	S	K	L	S	I	D	E	E	V	Y	F	E	N	L	M	Q	L	V	E	H	Y	T	T	D	A	D
Template Known Secondary structure				S										T		S			T	T								S	S	S	T	T	.	.									T	T											T	T				S	S	S	S	S		B	S	S													T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.										.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.
Query Sequence		S	V	Y	K	S	G	I	K	L	F	S	W	V	V	.	.	.	.	.	.	.	.	.	R	E	E	W	Q	L	Y	H	E	Q	I	N	L	G	K	K	L	G	N	G	E	F	G	E	V	F	Q	G	V	L	S	V	G	I	F	T	N	D	V	E	V	A	V	K	T	M	K	G	S	K	V	T	A	D	E	R	I
Query Conservation																.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.																		.	.	.
Template Conservation																																																								.	.	.	.	.	.																		.	.	.
Template Sequence		G	L	C	T	R	L	I	K	P	K	V	M	E	G	T	V	A	A	Q	D	E	F	Y	R	S	G	W	A	L	N	M	K	E	L	K	L	L	Q	T	I	G	K	G	E	F	G	D	V	M	L	G	D	Y	R	.	.	.	.	.	.	G	N	K	V	A	V	K	C	I	K	N	D	A	T	A	Q	A	.	.	.
Template Known Secondary structure		T	S	S	S				S	B				S	S											T	T		B			G	G	G											T	T									T	.	.	.	.	.	.	T									S	S		T	T	S			.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.																		.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.																					.
Query SS confidence																														.																					.
Query Sequence		T	F	L	R	E	A	N	L	M	L	K	L	N	H	K	Y	V	V	R	L	Y	G	V	A	T	Q	Q	E	.	P	I	M	I	V	M	E	L	C	S	G	G	C	L	K	S	R	I	E	K	.	K	D	E	Q	L	S	D	V	L	K	R	K	Y	C	K	Q	I	A	K	G	M	R	Y	L	E	K	K	Q	V	I
Query Conservation																														.																					.
Alig confidence		.																												.																					.
Template Conservation		.
Template Sequence		.	F	L	A	E	A	S	V	M	T	Q	L	R	H	S	N	L	V	Q	L	L	G	V	I	V	E	E	K	G	G	L	Y	I	V	T	E	Y	M	A	K	G	S	L	V	D	Y	L	R	S	R	G	R	S	V	L	G	G	D	C	L	L	K	F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	N	F	V
Template Known Secondary structure		.									T	T				T	T	B										S	S	S										T	T		B										T	T	T																							T	T		B
Template Predicted Secondary structure		.
Template SS confidence
			233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		H	R	D	L	A	A	R	N	V	L	L	D	K	S	D	N	C	K	I	S	D	F	G	L	S	L	F	G	K	L	H	K	E	Q	K	L	M	K	V	P	I	R	W	L	A	P	E	T	L	L	K	G	I	Y	S	S	K	S	D	V	W	S	F	G	V	V	M	F	E	V	F	S	.	G	E	Y	P	Y	A	D
Query Conservation																																																																										.
Alig confidence																															.	.	.	.	.	.	.	.																																				.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		H	R	D	L	A	A	R	N	V	L	V	S	E	D	N	V	A	K	V	S	D	F	G	L	T	K	E	A	G	.	.	.	.	.	.	.	.	K	L	P	V	K	W	T	A	P	E	A	L	R	E	K	K	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R
Template Known Secondary structure			S				G	G	G					T	T									T	T		B				.	.	.	.	.	.	.	.				T	T	T	S						T	T	T																				T	T	T			S	S	T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340									.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	V	L	K	E	L	R	R	K	V	A	H	E	N	L	R	L	K	P	P	S	D	M	P	T	D	D	A	K	V	M	E	M	C	F	E	P	V	D	N	R	A	T	F	V	Q	V	C	N	R	Y	K	D	L
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		I	P	.	L	K	D	V	V	P	R	V	E	K	G	Y	K	M	D	A	P	D	G	C	P	P	A	V	Y	D	V	M	K	N	C	W	H	L	D	A	A	T	R	P	T	F	L	Q	L	R	E	Q	L	E	H	I
Template Known Secondary structure		S		.	T	T	T						T	T	T							T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure				.
Template SS confidence
		390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.