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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank100Aligned Residues253
% Identity35%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150..... ....160........ .170.........180.........190.........200.
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Query Sequence  INHDSIVANKKLGEGAFGDVFIAELDQGGK. . QEVAVKTMRAEAT. . REARLRFMKEARLMRKYQHKHVVKLIGVAIHEH
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Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT. P
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GGG



B

TTS
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S



ST


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S.S
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   121........130.........140.........150.........160.........170.........180.........190........ .
 
   202.......210......... 220.........230.........240.........250.........260.........270.........
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Query Sequence  PLMIVMEYCPNGSLLSHL. . KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDE
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Template Sequence  PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR. . . .
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BSTT
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   200.........210.........220.........230.........240.........250.........260.........270.....
 
   280.........290.........300.........310.........320.........330.........340.........350.........
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Query Sequence  IKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVADV
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Template Sequence  . . . . . ALPVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV
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   276...280.........290.........300.........310.........320.........330.........340.........350
 
   360.........370.........380.........
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Query Sequence  VTGTCWQKNPEKRSTMDSIHKKLREFYESK
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Template Sequence  M. VQCWAHKPEDRPTFVALRDFLLEAQPTD
Template Known Secondary structure  .T
SSGGGS

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   364 .....370.........380.........390..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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