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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank111Aligned Residues247
% Identity24%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160........ .170.........180.........190.........200.....
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Query Sequence  HDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEAT. . REARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMI
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Template Sequence  NERYKIVDKLGGGGMSTVYLAE. DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL
Template Known Secondary structure  TTTT.TTT



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   7..10.........20........ .30.........40.........50.........60.........70.........80.....
 
   206...210.........220. ........230.........240.........250.........260.........270.........280....
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Query Sequence  VMEYCPNGSLLSHLKK. NKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIKDET
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Template Sequence  VMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA. . . . . . . . . .
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   86...90.........100.........110.........120.........130.........140.........150.....
 
   285....290.........300.........310.........320.........330.........340...... ...350.........360.
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Query Sequence  LEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRM. . . KMPDGTHPTVADVVT
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Template Sequence  . . . KTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVI.
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   156...160.........170.........180......... 190.........200.........210.........220.........230
 
   362.......370.. .......380.........390
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Query Sequence  GTCWQKNPEKR. STMDSIHKKLREFYESKK
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Template Sequence  LRATEKDKANRYKTIQEMKDDLSSVLHENR
Template Known Secondary structure  T
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   246...250.........260.........270.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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