Job Description Q22146 Confidence 100.00% Date Sat Apr 13 13:24:31 BST 2013 Rank 45 Aligned Residues 249 % Identity 36% Template c4aojA_ PDB info PDB header:transferase Chain: A: PDB Molecule:high affinity nerve growth factor receptor; PDBTitle: human trka in complex with the inhibitor az-23 Resolution 2.75 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		W	L	I	N	H	D	S	I	V	A	N	K	K	L	G	E	G	A	F	G	D	V	F	I	A	E	L	D	.	Q	G	G	K	Q	E	V	A	V	K	T	M	R	A	E	A	T	R	E	A	R	L	R	F	M	K	E	A	R	L	M	R	K	Y	Q	H	K	H	V	V	K	L	I	G	V	A	I	H	E	H	P
Query Conservation																														.
Alig confidence																														.													.
Template Conservation																																											.
Template Sequence		H	H	I	K	R	R	D	I	V	L	K	W	E	L	G	E	G	A	F	G	K	V	F	L	A	E	C	H	N	L	L	P	K	M	L	V	A	V	K	A	L	.	K	E	A	S	E	S	A	R	Q	D	F	Q	R	E	A	E	L	L	T	M	L	Q	H	Q	H	I	V	R	F	F	G	V	C	T	E	G	R	P
Template Known Secondary structure			B			G	G	G											S	S									S	S	S												.	S			S															T	T				T	T	B									S	S	S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.		.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		L	M	I	V	M	E	Y	C	P	N	G	S	L	L	S	H	L	K	K	.	.	.	.	.	N	K	V	S	L	I	E	K	L	R	F	T	T	E	A	A	D	G	I	A	Y	L	E	R	S	K	C	I	H	R	D	I	A	A	R	N	C	L	L	S	A	K	N	E	L	K	I	S	D	F	G	M	S	D	N	K
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																																																							.	.
Template Conservation																																																																																.	.
Template Sequence		L	L	M	V	F	E	Y	M	R	H	G	D	L	N	R	F	L	R	S	H	G	P	D	P	G	P	L	G	L	G	Q	L	L	A	V	A	S	Q	V	A	A	G	M	V	Y	L	A	G	L	H	F	V	H	R	D	L	A	T	R	N	C	L	V	G	Q	G	L	V	V	K	I	G	D	F	G	T	M	L	.	.
Template Known Secondary structure										T	T		B							T	S	S					S																							T	T				S				G	G	G					T	T	T												.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	I	K	D	E	T	L	E	K	V	P	I	K	W	L	A	P	E	T	M	Q	E	K	V	Y	T	H	K	T	D	I	W	T	F	G	V	L	V	W	E	I	Y	S	D	G	A	E	P	Y	P	G	L	T	K	I	Q	T	R	A	K	I	V	V	N	D	Y	R	M	K	M	P	D	G	T	H	P	T	V	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																																						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																																						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	P	I	R	W	M	P	P	E	S	I	L	Y	R	K	F	T	T	E	S	D	V	W	S	F	G	V	V	L	W	E	I	F	T	Y	G	K	Q	P	W	Y	Q	L	S	N	T	E	A	I	D	C	I	T	Q	.	G	R	E	L	E	R	P	R	A	C	P	P	E	V	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		G	G	G							T	T																					T	T	S			T	T		S	S												.	T							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																						.
Template SS confidence
													690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.		.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	T	G	T	C	W	Q	K	N	P	E	K	R	S	T	M	D	S	I	H	K	K	L	R	E	F	Y	E	S
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		A	I	M	.	R	G	C	W	Q	R	E	P	Q	Q	R	H	S	I	K	D	V	H	A	R	L	Q	A	L	A	Q	A
Template Known Secondary structure					.						S	S	T	T	T	S																S
Template Predicted Secondary structure					.
Template SS confidence
		758	.	760		.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D