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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank298Aligned Residues238
% Identity24%Templatec3ttjA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:mitogen-activated protein kinase 10; PDBTitle: crystal structure of jnk3 complexed with cc-359, a jnk inhibitor for2 the prevention of ischemia-reperfusion injury
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.... .....170.........180.........190......... 200.
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMR. AEATREARLRFMKEARLMRKYQHKHVVKLIGVAIH. . . . . . EH
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Template Sequence  KRYQNLKPIGSGAQGIVCAAY. DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ
Template Known Secondary structure  TT
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   62.......70.........80.. .......90.........100.........110.........120.........130.........140
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  PLMIVMEYCPNGSLLSHLKKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIK
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Template Sequence  DVYLVMELMDANLCQVIQMEL. . DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLASFMMV. .
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   141........150.........160. ........170.........180.........190.........200.........210......
 
   282.......290.........300.........310.........320.........330.........340.
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Query Sequence  DETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVV. . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR. HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY
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   226...230.........240.........250........ .260.........270.........280.........290.......
 
   342.......350.........360.........370.........380
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Query Sequence  . . . . . . . . . . . . . . . . . . . . NDYRMKMPDGTHPTVADVVTGTCWQKNPEKRSTMDSIHK
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Template Sequence  VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL. SKMLVIDPAKRISVDDALQ
Template Known Secondary structure  TTS






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   298.300.........310.........320.........330...... ...340.........350.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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