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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank40Aligned Residues241
% Identity22%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.........200.........210.
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Query Sequence  VANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIVMEYCP
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Template Sequence  SYFKVRKLGSYGEVLLCK. EKNGHSEKAIKVIKKKF. . . . HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYE
Template Known Secondary structure  T

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T....T


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T
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   56...60.........70... ......80.........90 .........100.........110.........120.........130
 
   212.......220... ......230.........240.........250.........260 .........270.........280.......
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Query Sequence  NGSLLSHLKKNK. VSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLL. . . SAKNELKISDFGMSDNKDEIKDETLEK
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Template Sequence  GGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL
Template Known Secondary structure  T
BS


TT
S

SGGGSSTT

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TT


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B



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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   288.290.........300.........310.........320.........330.........340......... 350.........360.....
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Query Sequence  VPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMP. . DGTHPTVADVVTGTCW
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Template Sequence  GTAYYIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELI. KLML
Template Known Secondary structure  S
TTT

TT.
B
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   229230.........240. ........250.........260. ........270.........280.........290.........300. ....
 
   366...370.........380
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Query Sequence  QKNPEKRSTMDSIHK
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Template Sequence  TYDYNKRCTAEEALN
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SSTTTS

T
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   306...310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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