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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank300Aligned Residues235
% Identity22%Templatec3pg1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase, putative (map kinase-like PDBTitle: map kinase lmampk10 from leishmania major (1.95 angs resolution)
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160........ .170.........180.........190...
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Query Sequence  HDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEAT. . . . . . . . . . REARLRFMKEARLMRKYQHKHVVKL. . . .
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Template Sequence  QSPYTVQRFISSGSYGAVCAG. . VDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF
Template Known Secondary structure  T
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   20.........30.........40 .........50.........60.........70.........80.........90.......
 
   194.....200.........210......... 220.........230.........240.........250.........260.........270.
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Query Sequence  . IGVAIHEHPLMIVMEYCPNGSLLSHL. KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDF
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Template Sequence  VHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   272.......280.........290.........300.........310.........320.........330.........340........
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Query Sequence  GMSDNKDEIKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKM. . .
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Template Sequence  NLHRWY. . . . . . . . . . . . . . RAPELVMQFKGFTKLVDMWSAGCVMAEMFN. RKALFRGSTFYNQLNKIVEVVGTPKIEDV
Template Known Secondary structure  T

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   178.180... ......190.........200.........210... ......220.........230.........240..
 
   349350.........360.........370.........380
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . PDGTHPTVADVVTGTCWQKNPEKRSTMDSIHK
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Template Sequence  VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLI. AKMLEFNPQRRISTEQALR
Template Known Secondary structure  TS
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   258.260.........270.........280.........290...... ...300.........310.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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