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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank23Aligned Residues259
% Identity23%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140.........150.........160....... ..170.........180..... ....190..
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Query Sequence  RRPMERSPWLINHDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEA. . TREARLRFMKEARLMRKY. QHKHVVK
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Template Sequence  EEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLSE. RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ
Template Known Secondary structure  TGGGT





TTSSBTTTB
.SSS

TTTTT
TT

TTB

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   281........290.........300.........310.... .....320.........330.........340.........350.........
 
   193......200.........210.........220... ......230.........240.........250.........260.........270.
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Query Sequence  LIGVAIHEHPLMIVMEYCPNGSLLSHLKKNK. VSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDF
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Template Sequence  LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF
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B
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   406...410.........420.........430.........440.........450.........460.........470.........480.....
 
   272.......280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  GMSDNKDEIKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDG
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Template Sequence  GMCKENIWDGVTTKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEHNV. . AYPKS
Template Known Secondary structure  TT



TT

B


S
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T


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   486...490.........500.........510.........520.........530..... ....540.........550....... ..560..
 
   352.......360.........370.... .....
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Query Sequence  THPTVADVVTGTCWQKNPEKRST. . . . . MDSIH
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Template Sequence  MSKEAVAIC. KGLMTKHPGKRLGCGPEGERDIK
Template Known Secondary structure  S
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SSSTT
TT
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   564.....570.. .......580.........590.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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