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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank124Aligned Residues239
% Identity23%Templatec3p23B_
PDB info PDB header:hydrolase, transferaseChain: B: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the human kinase and rnase domains in complex2 with adp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.... .....150.........160.........170.........180..... ....190.........200...
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Query Sequence  INHDSIVANKKLGEGAFGD. VFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKY. QHKHVVKLIGVAIHEHPL
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Template Sequence  VGKISFCPKDVLGHGAEGTIVYRGMF. . . DNRDVAVKRILPECFSF. . . . ADREVQLLRESDEHPNVIRYFCTEKDRQFQ
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   566...570.........580.........590. ........600........ .610.........620.........630........
 
   204.....210.........220.. .......230.........240.........250.........260..... ....270......
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Query Sequence  MIVMEYCPNGSLLSHLKKN. . KVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNE. . . . . LKISDFGMSDN
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Template Sequence  YIAIELCA. ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK
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   639640...... ...650.........660.........670.........680.........690.........700.........710.......
 
   277..280.........290.........300.........310.........320.........330.........340.........350......
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Query Sequence  KDEIKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTV
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Template Sequence  LAP. . . . . . . . GTEGWIAPEMLSEENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVI
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   718.720 .........730.........740.........750.........760.........770.........780.........
 
   357..360.........370.........380
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Query Sequence  ADVVTGTCWQKNPEKRSTMDSIHK
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Template Sequence  ARELIEKMIAMDPQKRPSAKHVLK
Template Known Secondary structure  T
SSGGG


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   805....810.........820........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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