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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank294Aligned Residues240
% Identity26%Templatec3oz6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 1, serine/threonine PDBTitle: crystal structure of mapk from cryptosporidium parvum, cgd2_1960
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180...... ...190....... ..200.....
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQ. HKHVVKLIGVA. . IHEHPLMI
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Template Sequence  RKYELVKKI. . . . . . . VWKSI. DRRTGEVVAVKKIFDQ. NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL
Template Known Secondary structure  TT

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   910....... ..20.. .......30........ .40.........50.........60.........70.........
 
   206...210.........220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  VMEYCPNGSLLSHLKKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIKDETL
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Template Sequence  VFDYME. TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN
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S.T


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   8990.... .....100.........110.........120.........130.........140.........150.........160.......
 
   286 ...290.........300.........310.........320.........330.........340.......
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Query Sequence  E. . . . . . . . KVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMK. . . . . . . . . .
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Template Sequence  NIPLSINYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC. GKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSP
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   168.170.........180.........190.........200.........210. ........220.........230.........240......
 
   348.350.........360.........370.........380
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MPDGTHPTVADVVTGTCWQKNPEKRSTMDSIHK
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Template Sequence  FAKTMIESLKEKVEKRDIFTKWKNLLLKINPKADCNEEALDLL. DKLLQFNPNKRISANDALK
Template Known Secondary structure  S






TT



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   262.......270.........280.........290.........300.... .....310.........320...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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