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Job DescriptionQ22146
Confidence97.51%DateSat Apr 13 13:24:31 BST 2013
Rank418Aligned Residues135
% Identity14%Templatec3ovcA_
PDB info PDB header:transferase/antibioticChain: A: PDB Molecule:hygromycin-b 4-o-kinase; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(4)-ia
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180......... 190.........200.. .......210.
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Query Sequence  KKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKH. . VVKLIGVAIHEHP. LMIVMEYCP
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Template Sequence  XQLSEGEESRAFSFDV. . . GGRGYVLRVNSCA. . . . . . DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ
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   26...30.........40. ........50.... .....60.........70.........80.........90......
 
   212.......220.. .......230.
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Query Sequence  NGSLLSHLKKN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KVSLIEKLR
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Template Sequence  GVTLQDLPETELPAVLQPVAEAXDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVXDDTVSASVAQ
Template Known Secondary structure  STTTS
GGGSGGG


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B

TTSBSSGGG
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   232.......240... ......250.........260.........270........
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Query Sequence  FTTEAADGIAYL. ERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKD
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Template Sequence  ALDELXLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAXFGD
Template Known Secondary structure  GGG





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   177..180.........190.........200.........210.........220....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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