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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank76Aligned Residues241
% Identity24%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180.........190.........200........
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIVME
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Template Sequence  EMYQRVKKLGSGE. . . VLLCR. DKVTHVERAIKIIRKSSNSK. . . . LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME
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   60.........70.. ..... ..80.........90....... ..100.........110.........120.........130.
 
   209210......... 220.........230.........240.........250.........260 .........270.........280....
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Query Sequence  YCPNGSLLSHL. KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLL. . . SAKNELKISDFGMSDNKDEIKDET
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Template Sequence  CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK
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S
BSS

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B
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   140.........150.........160.........170.........180.........190.........200.........210.........
 
   285....290.........300.........310.........320.........330.........340.........350 .........360..
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Query Sequence  LEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPD. . GTHPTVADVVTG
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Template Sequence  ERLGTAYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI. K
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   220.........230.... .....240.........250..... ....260.........270.........280.........290..... .
 
   363......370.........380
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Query Sequence  TCWQKNPEKRSTMDSIHK
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Template Sequence  QMLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   297..300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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