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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank236Aligned Residues245
% Identity23%Templatec3kvwA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity tyrosine-phosphorylation-regulated kinase PDBTitle: crystal structure of dual-specificity tyrosine phosphorylation2 regulated kinase 2 (dyrk2) in complex with an indirubin ligand
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180....... ..190.........200.
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Query Sequence  HDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQH. . . . . . KHVVKLIGVAIHEH
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Template Sequence  AYRYEVLKVIGKGSFGQVVKAY. DHKVHQHVALKMVR. . NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN
Template Known Secondary structure  TTTSSS.TTTT
..S
TT
TTS
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B

TT
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   146...150.........160....... ..170.........180. ........190.........200.........210.........220..
 
   202.......210.........220. ........230.........240.........250.........260.... .....270.......
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Query Sequence  PLMIVMEYCPNGSLLSHLKK. . NKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKN. . ELKISDFGMSDNK
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Template Sequence  HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE
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BTTT



T
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SGGGSSTTS




TT
T
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   223......230.........240.........250.........260.........270.........280.........290.........300..
 
   278.280.........290.........300.........310.........320.........330.........340.......
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Query Sequence  DEIKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMK. . . . . . . . . .
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Template Sequence  HQRVYTIQSRF. . . YRAPEVILGARYGMPIDMWSLGCILAELLT. GYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRA
Template Known Secondary structure  T







GG...G

TB


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   303......310... ......320.........330.........340... ......350.........360.........370........
 
   348.350.........360.........370.........380
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MPDGTHPTVADVVTGTCWQKNPEKRSTMDSIHK
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Template Sequence  KNFVSKGYPRYCTVTTLSDVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFL. KQCLEWDPAVRMTPGQALR
Template Known Secondary structure  B



BTTS








TT


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   380.........390.........400.........410.........420.........430...... ...440.........450.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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