Job Description Q22146 Confidence 100.00% Date Sat Apr 13 13:24:31 BST 2013 Rank 291 Aligned Residues 217 % Identity 26% Template c3kn5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase alpha-5; PDBTitle: crystal structure of the c-terminal kinase domain of msk1 in complex2 with amp-pnp Resolution 2.40 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		K	K	L	G	E	G	A	F	G	D	V	F	I	A	E	L	D	Q	G	G	K	Q	E	V	A	V	K	T	M	R	A	E	A	T	R	E	A	R	L	R	F	M	K	E	A	R	L	M	R	K	Y	Q	.	H	K	H	V	V	K	L	I	G	V	A	I	H	E	H	P	L	M	I	V	M	E	Y	C	P	N	G
Query Conservation																																																						.
Alig confidence																	.																		.	.	.	.																.
Template Conservation																	.																		.	.	.	.
Template Sequence		K	P	L	G	E	G	S	F	S	I	C	R	K	C	V	.	H	K	K	S	N	Q	A	F	A	V	K	I	I	S	K	R	M	.	.	.	.	E	A	N	T	Q	K	E	I	T	A	L	K	L	C	E	G	H	P	N	I	V	K	L	H	E	V	F	H	D	Q	L	H	T	F	L	V	M	E	L	L	N	G	G
Template Known Secondary structure				S	B			T	T								.		T	T	T	T										G	G	G	.	.	.	.														T	T	T		T	T	B										S	S											S
Template Predicted Secondary structure																	.																		.	.	.	.
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.					.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		214	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		S	L	L	S	H	L	.	K	K	N	K	V	S	L	I	E	K	L	R	F	T	T	E	A	A	D	G	I	A	Y	L	E	R	S	K	C	I	H	R	D	I	A	A	R	N	C	L	L	S	A	K	N	E	L	K	I	S	D	F	G	M	S	D	N	K	D	E	I	K	D	E	T	L	E	K	V	P	I	K	W
Query Conservation								.
Alig confidence								.																																												.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	F	E	R	I	K	K	K	K	H	F	S	E	T	E	A	S	Y	I	M	R	K	L	V	S	A	V	S	H	M	H	D	V	G	V	V	H	R	D	L	K	P	E	N	L	L	F	T	D	.	L	E	I	K	I	I	D	F	G	F	A	R	L	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B							T		S			B																					T	T								G	G	G						.									T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.		.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.								.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.												.	.
Query SS confidence																																									.	.	.	.	.	.	.												.	.
Query Sequence		L	A	P	E	T	M	Q	E	K	V	Y	T	H	K	T	D	I	W	T	F	G	V	L	V	W	E	I	Y	S	D	G	A	E	P	Y	P	G	L	T	.	.	.	.	.	.	.	K	I	Q	T	R	A	K	I	V	V	N	.	.	D	Y	R	M	K	M	P	D	G	T	H	P	T	V	A	D	V	V	T	G	T
Query Conservation																																									.	.	.	.	.	.	.												.	.
Alig confidence		.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.												.	.																			.
Template Conservation		.	.	.	.	.	.	.																							.																																																.
Template Sequence		.	.	.	.	.	.	.	P	N	G	Y	D	E	S	C	D	L	W	S	L	G	V	I	L	Y	T	M	L	S	.	G	Q	V	P	F	Q	S	H	D	R	S	L	T	C	T	S	A	V	E	I	M	K	K	I	K	K	G	D	F	S	F	E	G	E	A	W	K	N	V	S	Q	E	A	K	D	L	I	.	Q	G
Template Known Secondary structure		.	.	.	.	.	.	.						T																	.	S			T	T			S	S		S	S															T						S	T	T	T	S	S										.
Template Predicted Secondary structure		.	.	.	.	.	.	.																							.																																																.
Template SS confidence
									574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.		.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.		.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	Q	K	N	P	E	K	R	S	T	M	D	S	I	H	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	T	V	D	P	N	K	R	L	K	M	S	G	L	R	Y
Template Known Secondary structure						S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D