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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank171Aligned Residues259
% Identity29%Templatec3kexA_
PDB info PDB header:transferaseChain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: crystal structure of the catalytically inactive kinase2 domain of the human epidermal growth factor receptor 33 (her3)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150..... ....160.........170.........180.........190.........200.
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Query Sequence  LINHDSIVANKKLGEGAFGDVFIAELDQGGK. . . QEVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEH
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Template Sequence  IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS
Template Known Secondary structure  B

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   684.....690.........700.........710.........720.........730.........740.........750.........760...
 
   202.......210......... 220.........230.........240.........250.........260.........270.........
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Query Sequence  PLMIVMEYCPNGSLLSHL. . KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDE
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Template Sequence  L. QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP.
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   764 .....770.........780.........790.........800.........810.........820.........830.........840.
 
   280.........290.........300.........310.........320.........330.........340.........350.........
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Query Sequence  IKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVADV
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Template Sequence  . PDDKQLLTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK. GERLAQPQICTIDVYMV
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   842.......850.........860.........870.........880.........890.........900.. .......910.........
 
   360.........370.........380........
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Query Sequence  VTGTCWQKNPEKRSTMDSIHKKLREFYES
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Template Sequence  M. VKCWMIDENIRPTFKELANEFTRMARD
Template Known Secondary structure  .T
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   925 ....930.........940.........950..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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