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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank148Aligned Residues229
% Identity28%Templatec3is5E_
PDB info PDB header:transferaseChain: E: PDB Molecule:calcium-dependent protein kinase; PDBTitle: crystal structure of cdpk kinase domain from toxoplasma gondii,2 tgme49_018720
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180.........190.........200........
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIVME
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Template Sequence  DLFIFKRKLGSGAFGDVHLVE. ERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME
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   133......140.........150... ......160.........170.........180.........190.........200.........210.
 
   209210.........220... ......230.........240.........250.........260.. .......270.........280
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Query Sequence  YCPNGSLLSHLKKNK. . . . . VSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSA. . . KNELKISDFGMSDNKDEI
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Template Sequence  TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE. . . . .
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   212.......220.........230.........240.........250.........260.........270.........280......
 
   281........290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  KDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVADVV
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Template Sequence  . . . . . . LFKALYMAPEVFK. RDVTFKCDIWSAGVVMYFLLT. GCLPFTGTSLEEVQQKAT. . . . . . . . YKPLTPQAVDLL
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   287..290......... 300.........310.........320 .........330........ .340.........350
 
   361........370.........380
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Query Sequence  TGTCWQKNPEKRSTMDSIHK
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Template Sequence  . KQMLTKDPERRPSAAQVLH
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   371........380.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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