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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank98Aligned Residues248
% Identity24%Templatec3hztA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase 3; PDBTitle: crystal structure of toxoplasma gondii cdpk3, tgme49_105860
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160........ .170.........180.........190.........200......
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEAT. . REARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIV
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Template Sequence  DRYQRVKKLGSGAYGEVLLCK. DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLV
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Query Sequence  MEYCPNGSLLSHL. KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLL. . . SAKNELKISDFGMSDNKDEIKD
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Template Sequence  MEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF. . . . .
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   153......160.........170.........180.........190.........200.........210.........220.......
 
   283......290.........300.........310.........320.........330.........340......... 350.........360
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Query Sequence  ETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMP. . DGTHPTVADVV
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Template Sequence  . . . . EVGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV
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   228.230.........240.........250.........260.. .......270.........280.........290.........300..
 
   361........370.........380. .......
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Query Sequence  TGTCWQKNPEKRSTMDSIHKK. . LREFYES
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Template Sequence  . KLMLTYEPSKRISAEEALNHPWIVKFCSQ
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   311........320.........330.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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