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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank219Aligned Residues256
% Identity22%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160....... ..170.........180.........190.........200......
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Query Sequence  HDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEA. TREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIV
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Template Sequence  QKKYHLKGAIGQGSYGVVRVAI. ENQTRAIRAIKIMNKNKIRQKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV
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   7..10.........20........ .30.........40.........50.........60.........70.........80.....
 
   207..210......... 220.........230.........240.......
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Query Sequence  MEYCPNGSLLSHL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KKNKVSLIEKLRFTTEAADGIAYLERSK
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Template Sequence  MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQG
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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   248.250.........260.........270.........280.........290.........300 .........310.........320......
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Query Sequence  CIHRDIAARNCLLSAKNELKISDFGMSDNKDEIKDETLEKVPIKWLAPETMQE. KVYTHKTDIWTFGVLVWEIYSDGAEP
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Template Sequence  ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM. GAVP
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   171........180.........190.........200.........210.........220.........230.........240..... ....
 
   327..330.........340......... 350.........360.........370.........380........
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Query Sequence  YPGLTKIQTRAKIVVNDYRMKMP. . DGTHPTVADVVTGTCWQKNPEKRSTMDSIHKKLREFYES
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Template Sequence  FPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLL. SNLLNRNVDERFDAMRALQ. . HPWISQ
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   258.260.........270.........280.........290... ......300.........310.. ......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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